• This is a web application designed to build a system for molecular dynamics simulation. It provides functions to generate 2D material system with nanopore, DNA system and, composite system of them as well as an analysis tool for ions-flow (densflux). The list of available applications is on the left-side and, other functions are scheduled to be added.
• This application uses GROMACS mainly. GROMACS is an engine to perform molecular dynamics simulations and energy minimization. These are two of the many techniques that belong to the realm of computational chemistry and molecular modeling and, all applications in this web site is performed by GROMACS. For more detail, click here